Objective: Patients infected with severe acute respiratory syndrome-coronavirus-2 may progress with severe clinical symptoms and patients may be hospitalized in intensive care for a long time. In patients with long-term intensive care hospitalization, secondary infections develop as a result of the pathophysiology of the disease and the treatments used. The aim of this study is to investigate the incidence of secondary infections in patients with coronavirus disease-2019 (COVID-19) and to identify common pathogen groups. Material and Methods: Four hundred and sixty one patients with a diagnosis of COVID-19 who were followed up in the intensive care unit at Afyonkarahisar Health Sciences University Faculty of Medicine Hospital between 20 March 2020 and 31 May 2021 were included in the study. Demographic data, co-morbidities, clinical features, laboratory data and culture growth data of the patients were recorded retrospectively. Results: Nosocomial secondary infections were detected in 132 (28.6%) of 461 patients. Acinetobacter baumannii 39/53 (73.5%) growth was observed in the majority of the lower respiratory tract sample cultures. There was 28/49 (57.1%) Staphylococcus aureus growth in blood cultures, and 21/42 (50%) candida spp. growth in urine cultures. Conclusion: In this study, we found that the incidence of infection secondary to COVID-19 pneumonia was high. In addition, it was determined that the secondary infection rate was high in patients with PaO2/FiO2<200.
Keywords: Acinetobacter baumannii; bacterial infections; COVID-19; nosocomial infections; secondary infections
Amaç: Şiddetli akut solunum sendromu-koronavirüs-2 ile enfekte olan hastalar ciddi klinik semptomlarla seyredebilir ve uzun süre yoğun bakımda kalabilir. Uzun süreli yoğun bakımda kalışlarla birlikte hastalığın patofizyolojisi ve kullanılan tedaviler sonucunda sekonder enfeksiyonlar gelişmektedir. Bu çalışmanın amacı, koronavirüs hastalığı- 2019 [coronavirus disease-2019 (COVID-19)] olan hastalarda ikincil enfeksiyonların insidansını araştırmak ve yaygın patojen gruplarını tanımlamaktır. Gereç ve Yöntemler: Afyonkarahisar Sağlık Bilimler Üniversitesi Tıp Fakültesi Hastanesinde 20 Mart 2020-31 Mayıs 2021 tarihleri arasında COVID-19 yoğun bakım ünitesinde takip edilen 461 COVID-19 tanılı hasta çalışmaya dâhil edildi. Retrospektif olarak hastaların demografik verileri, komorbiditeleri, klinik özellikleri, laboratuvar verileri ve kültür üreme verileri kaydedildi. Bulgular: Toplam 461 hastanın 132'sinde (%28,6) de nozokomiyal sekonder enfeksiyon tespit edildi. Alt solunum yolu örnek kültürünün çoğunluğunda Acinetobacter baumannii 39/53 (%73,5) üremesi olurken, kan kültürlerinde 28/49 (%57,1) Staphylococcus aureus üremesi, idrar kültüründe ise 21/42 (%50) candida spp. üremesi oldu. Sonuç: Bu çalışmada, COVID-19 pnömonisine sekonder gelişen enfeksiyon gelişme insidansının yüksek olduğunu bulduk. PaO2/FiO2<200 olan hastalarda sekonder enfeksiyonların yüksek olduğunu tespit ettik.
Anahtar Kelimeler: Acinetobacter baumannii; bakteriyel enfeksiyonlar; COVID-19; nozokomiyal enfeksiyon; sekonder enfeksiyonlar
- Chen N, Zhou M, Dong X, Qu J, Gong F, Han Y, et al. Epidemiological and clinical characteristics of 99 cases of 2019 novel coronavirus pneumonia in Wuhan, China: a descriptive study. Lancet. 2020;395(10223):507-13. [Crossref] [PubMed] [PMC]
- Guan WJ, Ni ZY, Hu Y, Liang WH, Ou CQ, He JX, et al; China Medical Treatment Expert Group for Covid-19. Clinical characteristics of coronavirus disease 2019 in China. N Engl J Med. 2020;382(18):1708-20. [PubMed] [PMC]
- Lai CC, Wang CY, Hsueh PR. Co-infections among patients with COVID-19: The need for combination therapy with non-anti-SARS-CoV-2 agents? J Microbiol Immunol Infect. 2020;53(4):505-12. [Crossref] [PubMed] [PMC]
- Sharifipour E, Shams S, Esmkhani M, Khodadadi J, Fotouhi-Ardakani R, Koohpaei A, et al. Evaluation of bacterial co-infections of the respiratory tract in COVID-19 patients admitted to ICU. BMC Infect Dis. 2020;20(1):646. [Crossref] [PubMed] [PMC]
- Garcia-Vidal C, Sanjuan G, Moreno-García E, Puerta-Alcalde P, Garcia-Pouton N, Chumbita M, et al; COVID-19 Researchers Group. Incidence of co-infections and superinfections in hospitalized patients with COVID-19: a retrospective cohort study. Clin Microbiol Infect. 2021;27(1):83-8. [Crossref] [PubMed] [PMC]
- T.C. Sağlık Bakanlığı Halk Sağlığı Genel Müdürlüğü. COVID-19 (SARS-CoV-2 Enfeksiyonu) Erişkin Hasta Tedavisi. Available from: [Link]
- Centers for Disease Control and Prevention [Internet]. [Cited: August 10, 2016]. CDC Diseases and organisms in healthcare settings. Available from: [Link]
- Yu Y, Xu D, Fu S, Zhang J, Yang X, Xu L, et al. Patients with COVID-19 in 19 ICUs in Wuhan, China: a cross-sectional study. Crit Care. 2020;24(1):219. [Crossref] [PubMed] [PMC]
- Dudoignon E, Caméléna F, Deniau B, Habay A, Coutrot M, Ressaire Q, et al. Bacterial Pneumonia in COVID-19 Critically Ill Patients: A Case Series. Clin Infect Dis. 2021;72(5):905-6. [Crossref] [PubMed] [PMC]
- Hughes S, Troise O, Donaldson H, Mughal N, Moore LSP. Bacterial and fungal coinfection among hospitalized patients with COVID-19: a retrospective cohort study in a UK secondary-care setting. Clin Microbiol Infect. 2020;26(10):1395-9. [Crossref] [PubMed] [PMC]
- Cao J, Tu WJ, Cheng W, Yu L, Liu YK, Hu X, et al. Clinical features and short-term outcomes of 102 patients with coronavirus disease 2019 in Wuhan, China. Clin Infect Dis. 2020;71(15):748-55. [Crossref] [PubMed] [PMC]
- Goyal P, Choi JJ, Pinheiro LC, Schenck EJ, Chen R, Jabri A, et al. Clinical Characteristics of Covid-19 in New York City. N Engl J Med. 2020;382(24): 2372-4. [Crossref] [PubMed] [PMC]
- Clancy CJ, Nguyen MH. Coronavirus disease 2019, superinfections, and antimicrobial development: what can we expect? Clin Infect Dis. 2020;71(10):2736-43. [Crossref] [PubMed] [PMC]
- Paget C, Trottein F. Mechanisms of bacterial superinfection post-influenza: a role for unconventional T cells. Front Immunol. 2019;10:336. [Crossref] [PubMed] [PMC]
- McArdle AJ, Turkova A, Cunnington AJ. When do co-infections matter? Curr Opin Infect Dis. 2018;31(3):209-15. [Crossref] [PubMed] [PMC]
- Zhang B, Liu S, Tan T, Huang W, Dong Y, Chen L, et al. Treatment with convalescent plasma for critically ill patients with severe acute respiratory syndrome coronavirus 2 infection. Chest. 2020;158(1):e9-e13. [Crossref] [PubMed] [PMC]
- Smith AM, McCullers JA. Secondary bacterial infections in influenza virus infection pathogenesis. Curr Top Microbiol Immunol. 2014;385:327-56. [Crossref] [PubMed] [PMC]
- Su IC, Lee KL, Liu HY, Chuang HC, Chen LY, Lee YJ. Severe community-acquired pneumonia due to Pseudomonas aeruginosa coinfection in an influenza A(H1N1)pdm09 patient. J Microbiol Immunol Infect. 2019;52(2):365-6. [Crossref] [PubMed]
- Giacobbe DR, Battaglini D, Ball L, Brunetti I, Bruzzone B, Codda G, et al. Bloodstream infections in critically ill patients with COVID-19. Eur J Clin Invest. 2020;50(10):e13319. [Crossref] [PubMed] [PMC]
- Buetti N, Ruckly S, de Montmollin E, Reignier J, Terzi N, Cohen Y, et al. COVID-19 increased the risk of ICU-acquired bloodstream infections: a case-cohort study from the multicentric OUTCOMEREA network. Intensive Care Med. 2021;47(2):180-7. Erratum in: Intensive Care Med. 2021;47(5):640. [Crossref] [PubMed] [PMC]
- Denny S, Rawson TM, Hart P, Satta G, Abdulaal A, Hughes S, et al. Bacteraemia variation during the COVID-19 pandemic; a multi-centre UK secondary care ecological analysis. BMC Infect Dis. 2021;21(1):556. [Crossref] [PubMed] [PMC]
- Díaz Pollán B, Guedez López GV, García Clemente PM, Jiménez González M, García Bujalance S, Gómez-Gil Mirá MR. Urinary Tract Infections in Hospitalized COVID-19 Patients, What's Up, Doc? J Clin Med. 2022;11(7):1815. [Crossref] [PubMed] [PMC]
- Arastehfar A, Carvalho A, van de Veerdonk FL, Jenks JD, Koehler P, Krause R, et al. COVID-19 Associated Pulmonary Aspergillosis (CAPA)-from immunology to treatment. J Fungi (Basel). 2020;6(2):91. [Crossref] [PubMed] [PMC]
- Ripa M, Galli L, Poli A, Oltolini C, Spagnuolo V, Mastrangelo A, et al; COVID-BioB study group. Secondary infections in patients hospitalized with COVID-19: incidence and predictive factors. Clin Microbiol Infect. 2021;27(3):451-7. [PubMed] [PMC]
.: İşlem Listesi